BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A01SP1|AL426125
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1802 1559 0.0
>3x_Contig1802
Length = 45229
Score = 1559 bits (786), Expect = 0.0
Identities = 787/788 (99%)
Strand = Plus / Plus
Query: 8 gatgaacatagccatatctgcctactattttttgacaatgaagctgcagcgttcatcaaa 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42621 gatgaacatagccatatctgcctactattttttgacaatgaagctgcagcgttcatcaaa 42680
Query: 68 gtgaatgaccataaatcccagacagaggatatggggactgaatacgtggaattacaacgt 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42681 gtgaatgaccataaatcccagacagaggatatggggactgaatacgtggaattacaacgt 42740
Query: 128 atatatatcctccaaaagtaccaaggtaaaggactgggccgtgttttaatggataaggtt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42741 atatatatcctccaaaagtaccaaggtaaaggactgggccgtgttttaatggataaggtt 42800
Query: 188 catgatatagcacagtcgtacggaaagaagaaaatctggctaggtgtttgggaacacaat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42801 catgatatagcacagtcgtacggaaagaagaaaatctggctaggtgtttgggaacacaat 42860
Query: 248 caaaaggcaatagatttctataaaaaattcggctttgaaattactggagaccactccttc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42861 caaaaggcaatagatttctataaaaaattcggctttgaaattactggagaccactccttc 42920
Query: 308 tttgttggtgacgatgaacagcgtgactatataatggagaaagtaatcacttaactacgt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42921 tttgttggtgacgatgaacagcgtgactatataatggagaaagtaatcacttaactacgt 42980
Query: 368 atatgccagtsagactaacgagaacattttaaattatataattatctgttggactggaca 427
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42981 atatgccagtgagactaacgagaacattttaaattatataattatctgttggactggaca 43040
Query: 428 ctgagtggaattgacacgagggacttgtcaataccttctgtggactcgacacagcataca 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43041 ctgagtggaattgacacgagggacttgtcaataccttctgtggactcgacacagcataca 43100
Query: 488 gattggtagactgatatcgacatgatgcattgtcccagtcacgcgtacttctgcatgagt 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43101 gattggtagactgatatcgacatgatgcattgtcccagtcacgcgtacttctgcatgagt 43160
Query: 548 tctggcactgactgttggagaaaatatcccttattttgtgtaatgcgcactcacaatggt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43161 tctggcactgactgttggagaaaatatcccttattttgtgtaatgcgcactcacaatggt 43220
Query: 608 gcatgcatattgtcacgtagcggccagctacaaagcacctctgttaacaccactttactt 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43221 gcatgcatattgtcacgtagcggccagctacaaagcacctctgttaacaccactttactt 43280
Query: 668 taaaagttaagatgcagtgctgaatgtattttgtcattgtaaagggattacccggtatga 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43281 taaaagttaagatgcagtgctgaatgtattttgtcattgtaaagggattacccggtatga 43340
Query: 728 ctctttatgcttatcttggaacggaaccttatcttatcaaacaagaaaaagcaagtactt 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43341 ctctttatgcttatcttggaacggaaccttatcttatcaaacaagaaaaagcaagtactt 43400
Query: 788 gaaatgga 795
||||||||
Sbjct: 43401 gaaatgga 43408
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5197
Number of Sequences: 1807
Number of extensions: 5197
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)